FERTILIA PARTNERS PROTOCOLS PAGE
3. Analysis of soil microorganisms quantity,
quality and activity.
A. Nowak, W. Michalcewicz, H. Wronkowska, K.
Przybulewska, Department of Microbiology;
J. Nowak,A. Cholewinski, A. Cyran, D. Klódka, H. Zakrzewska, Department
of Biochemistry;
Agriculture Academy - University in Szczecin, POLAND
Last updated April 13th, 1999
SOILS
Sampling sites
Sampling procedure
Incubation of soil
samples in the laboratory conditions
EXPERIMENTAL INSTRUMENTS
Bioscreen
BacTrac 4100
Ultragas U4S
METHODS
Determination
of the soil microbial biomass (SIR-method)
Determination of the
count of: bacteria, actinomyces, fungi, amylolitic organisms,
proteolitic organisms, lipolitic organisms in the soil
Cellulolitic
activity of the soil
Nitrification
activity in the soil
SOILS
Proposed sampling sites:
| No | Locality | Soil | C org. % | Mechanical composition | pHHCl | W H C % | ||
| sand | silt | Clay | ||||||
| 1 | Lipnik | sandy soil | 0,73 | 72 | 16 | 12 | 4,6 | 25,4 |
| 2 | Ostoja | clay soil | 1,2-1,8 | 42 | 32 | 7 | 6,9 | 22,0 |
Field soil for microbiological analyses will be sampled from the layer 0-20 cm with the soil stock. The leaves and stones and other material from the soil surface will be removed. For each sampling site (point), about 40 subsamples will be taken with the soil stock, and then joined to an average soil sample. The analysis shell be done immediately after sampling, if it is possible. In the other case, the samples shell be stored without drying in the temperature 40C.
Incubation of soil samples in the laboratory conditions
For laboratory investigations, soil samples will be incubated
in plastic bags, by 60% of the maximal field water capacity and
temperature 200C (if specific other conditions are not
required in experiment). The water content will be supplemented
with dest. water. Before sampling, content of the plastic bag
will be carefully mixed.
EXPERIMENTAL INSTRUMENTS
The Bioscreen instrument from Labsystem Corp. is a equipment to measure of the microbial growth, up to 200 samples simultaneously. The changes in the optical density of the medium with culture allow obtaining a growth curves. It is possible to test the sensibility of bacterial strains to stress factors or determine the counts of microorganisms in different samples.
BacTrac 4100, produced by Sy-Lab VgmbH, Austria, is an instrument to determinate the microorganisms growth by measuring the changes in the impendance of the culture medium. It is possible to detect the changes in growth intensity and determine the microbial counts in different samples.
Automatic CO2 analyser produced by Wöhstoff OHG,
Germany. Permanent determination of carbon dioxide evaluated from
soil with conductometric method. The sensibility is 0,0001% vol.
METHODS
Determination of the soil microbial biomass (SIR-method)
The amount of microbial biomass in soil will be analysed using a physiological method (Anderson and Domsch 1978). Maximal initial respiration rate of the soil is determined. Then, the soil is amended with adequate amount of glucose as mixture with talcum (1:5) and the CO2 production measured during 3 hours (in temperature 220C). The amount of microbial biomass is calculated from the equation: y = 40,04x + 0,37 (where x = CO2 production, y = microbial biomass).
Determination of the count of: bacteria, actinomyces, fungi, amylolitic organisms, proteolitic organisms, lipolitic organisms in the soil
The count of bacteria, actinomyces, fungi, amylolitic organisms, proteolitic organisms, lipolitic organisms in the soil will be determined with plate dilution method, using adequate media: Bunt-Rovira for bacteria, Martin for fungi, Küster for actinomyces, Emerson for amylolitic organisms, Kedzia and Konar for proteolitic organisms, medium with tributirin for lipolitic organisms.
Cellulolitic activity of the soil
Cellulolitic activity of the soil will be determined with Kuzniar method. A sheets of cellulose will be deposed in soil for 1 month. The loo of weight of the sheets during this time is a measure of cellulolitic activity of the soil microflora.
Nitrification activity in the soil
Tested soil will be amended with 200 mg/kg (NH4)2SO4
and incubated in laboratory conditions for 21 days. The amount of
the nitrate will be determined weekly with electron selective
electrode or colorimetric with use of diphenylsuphonic acid. The
increase of nitrate amount is a measure of the nitrification
activity in soil.